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OligoMix®

OligoMix® is a pooled mixture of oligonucleotide sequences used in high-throughput applications. This oligo mixture has a wide range of uses across multiple genomics applications, such as CRISPR guide RNAs or FISH probes.

We synthesize thousands of oligonucleotide sequences at once in parallel and then cleave the oligos, releasing them into solution in a single microtube. Synthesis occurs via standard DMT chemistry, assuring efficient stepwise yield and high-quality final products. The product is delivered as a pool in a single microtube, ready to use for your experiment.

Selected Applications

  • Library Construction

    In CRISPR-Cas9 mutation screens, guide RNAs targeting tens of thousands of sites within genes are cloned into viral vectors, and delivered as a pooled library into target cells along with Cas9. By identifying guide RNAs that are enriched or depleted in cells…

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  • Synthetic Biology

    One limitation for gene synthesis is the cost of making the building blocks (oligonucleotides) that are assembled together, to make genes. Multiplex, parallel DNA construction on a large scale requires pools of large numbers of short, synthetic oligos…

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  • Sequence Capture

    Several academic and commercial groups have developed a variety of capture methods to enrich or selectively amplify subsets of the genome in targeted sequencing. The key performance parameters of these methods are…

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  • FISH Applications

    Developing a FISH assay requires the use of oligonucleotide probe sets, such as oligopaint probes, which are fluorescently labeled, single-stranded DNA oligonucleotides that can be used to visualize genomic regions ranging in size from tens to hundreds of kilobases…

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Sample Requirements




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Microfluidic Array Platform—in situ Synthesis


OligoMix® achieves high synthesis purity because it is produced via an advanced microarray synthesis technology (µParaflo®) that integrates a photo-generated acid (PGA) chemistry, digital photolithography (DLP), and advanced microfluidics to enable high-throughput parallel synthesis of custom DNA microarrays. The PGA chemistry enables the use of standard oligo building blocks, and eliminates the need for any specially modified nucleotides, which may exhibit lower coupling efficiency. DLP technology enables programmable synthesis of custom sequences, and the µParaflo® microfluidic device contains each synthesis reaction within a picoliter-scale chamber, resulting in more uniform synthesis than reactions performed on the open surface of a slide.


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Synthesis Technology References


  • Gao X, Yu PY, LeProust E, Sonigo L, Pellois JP, Zhang H. (1998) Oligonucleotide synthesis using solution photogenerated acids. Journal of the American Chemical Society 120, 12698–12699 [abstract].
  • Srivannavit O, Gulari M, Gulari E, LeProust E, Pellois JP, Gao X, Zhou X. (2004) Design and fabrication of microwell array chips for a solution-based, photogenerated acid-catalyzed parallel oligonucleotide DNA synthesis. Sensors and Actuators A. 116, 150–160 [abstract].
  • Zhou X, Cai S, Hong A, Yu P, Sheng N, Srivannavit O, Yong Q, Muranjan S, Rouillard JM, Xia Y, Zhang X, Xiang Q, Ganesh R, Zhu Q, Makejko A, Gulari E, Gao X. (2004) Microfluidic picoarray synthesis of oligodeoxynucleotides and simultaneous assembly of multiple DNA sequences. Nucleic Acids Research 32, 5409–5417 [abstract].
  • Tian J, Gong H, Sheng N, Zhou X, Gulari E, Gao X, Church G. (2004) Accurate multiplex gene synthesis from programmable DNA chips. Nature 432, 1050–1054 [abstract].

Overview of the Service

Economical
At less than 0.8¢ per base, OligoMix® is about 20 times as cost- and time- efficient than conventional oligos. Delivered in a single microtube, it enables inexpensive genome-scale experiments.

Customizable

Customers can specify each oligonucleotide sequence (lengths up to 150-mers). We can synthesize OligoMix oligonucleotides containing labels, such as terminal phosphate, amino and thiol with linkers, biotin, FAM, or other dyes.

Reliable
An innovative microfluidic array platform ensures high-quality synthesis. Multiple QC steps are implemented at multiple stages of OligoMix manufacturing. OligoMix is subjected to both hybridization and qRT-PCR assays to assess final quality.

Simple & Fast
Download our Excel spreadsheet order form, paste your sequences, and email them back to us. The product can be delivered in 1-2 weeks.


DNA Sequencing
LC Sciences provides a variety of fast, comprehensive DNA sequencing solutions, including exome, whole-genome, whole-genome bisulfite, and reduced representation bisulfite sequencing.
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Microbial Sequencing
LC Sciences provides a fast, comprehensive microbial Sequencing solution including: 16S/18S/ITS Amplicon Sequencing, 5R 16S Amplicon Metagenomic Sequencing, Shotgun Metagenomic Sequencing.
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RNA Sequencing
LC Sciences offers a range of rapid and comprehensive RNA sequencing solutions, including poly-A RNA, micro RNA, total RNA, circRNA, m6A RNA, and more.
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Epigenomics
LC Sciences provides specialized epigenomics services, including Whole Genome Bisulfite Sequencing (comprehensive single-base resolution DNA methylation analysis), Reduced Representation Bisulfite Sequencing (targeted CpG-rich region study with lower cost), ATAC-seq (chromatin accessibility and regulatory element investigation), and CUT&Tag (high-resolution chromatin profiling for small/single-cell samples).
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Single Cell Sequencing
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Proteomics & Metabolomics
LC Sciences is focused on providing scientific researchers with more minute and precise protein expression-related services, including olink proteomics.
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Pre-made Library Sequencing
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Additional Services
Our portfolio of additional services includes Bioinformatic Services, Oligomix, MicroRNA Profiling Microarray, DNA/RNA Aptamer Microarray, Epitope Mapping, and Kinase Profiling. These services are designed to support various aspects of molecular research and biomolecular analysis, providing comprehensive solutions tailored to your specific scientific needs.
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