Decoding life sciences

Echoing life narratives

Single Cell ATAC Sequencing (scATAC-seq)

LC Sciences provides a DNA/RNA Aptamer Binding service using microarrays based on our in-house developed µParaflo® technology platform.

Your end-to-end research partner.

Ensuring reliable, publication-ready results.

Single-cell ATAC sequencing (scATAC-Seq) enables researchers to capture the chromatin accessibility profiles of tissues at single-cell resolution. By analyzing these profiles, scientists can uncover how tissues and individual cell types change during disease progression or respond to external stimuli and compounds through alterations in chromatin accessibility.

Applications

  • Identification of cell types through chromatin accessibility patterns

  • Analysis of cell states and regulatory dynamics

  • Investigation of developmental processes and disease mechanisms

Advantages

  • Advanced technology and instruments

    Utilizes cutting-edge single-cell ATAC-Seq technology to detect open chromatin regions and identify single-cell transcriptionally active regulatory elements.

    Extensive experience

    Each channel supports a capacity of 500 to 10,000 nuclei.

  • High capture efficiency

    Achieves a nuclear capture rate of up to 65%, ensuring high-quality data output and reliable downstream analysis.

    Reliable and fast turnaround time

    A dedicated project manager ensures that results are delivered within 30 business days of sample quality verification.

Sample Requirements


Single Cell ATAC Sequencing (scATAC-seq) Sample Requirements.png


Note: Sample amounts are provided for reference only.  For detailed information, please contact us with your customized requests.

Our Comprehensive Service


At LC Sciences, we offer a genome-wide microRNA expression profiling service utilizing a microarray detection system that was developed specifically for microRNA detection.  Send us your total RNA sample and we’ll perform all the necessary functions from sample QC through data analysis.  We can perform microarray analysis on a single sample to create a simple expression profile or we can hybridize two samples to the same microarray for “dual sample” analysis.  This is very useful whenever comparison of two samples is needed such as wildtype vs. mutant or samples treated in two different ways.

Our “Total RNA to Data” comprehensive service includes: Sample QC, Sample Preparation and Labeling, microRNA Detection (hybridization to a µParaflo® microfluidics chip), Array Scan and Data Extraction, and Full Data Analysis.


In about 2-3 weeks you will receive: original and processed scan images, array layout and a list of sequences,  raw and processed data, a list of differentially expressed transcripts (dual sample arrays only), and a summary of the results.


Bioinformatics Analysis Pipeline

Single Cell ATAC Sequencing (scATAC-seq) Bioinformatics Analysis Pipeline.png

Inform Us Of Your Future Project!

Leverage our expertise to acquire precise, robust data for your research. Our team ensures efficient delivery and reliable support. Contact us to discuss your project.

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Our portfolio of additional services includes Bioinformatic Services, Oligomix, MicroRNA Profiling Microarray, DNA/RNA Aptamer Microarray, Epitope Mapping, and Kinase Profiling. These services are designed to support various aspects of molecular research and biomolecular analysis, providing comprehensive solutions tailored to your specific scientific needs.
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