Decoding life sciences

Echoing life narratives

Whole Transcriptome Sequencing (WTS)

LC Sciences provides a microRNA (miRNA) expression profiling service using microarrays based on our in-house-developed μParaflo® technology platform.

Your end-to-end research partner.

Ensuring reliable, publication-ready results.

Whole Transcriptome Sequencing (WTS)—which combines RNA-Seq with rRNA removal and small RNA-Seq—is a powerful tool that provides a comprehensive overview of mRNAs, lncRNAs, circRNAs, and microRNAs, in biological samples under specific conditions. WTS enables the investigation of complex post-transcriptional regulatory mechanisms, particularly the competitive endogenous RNA (ceRNA) network. In this network, ceRNAs such as mRNAs, lncRNAs, and circRNAs act as molecular sponges for microRNAs (miRNAs) by binding to their miRNA recognition sites, thereby relieving repression on the target genes of the corresponding miRNA family.

Applications

  • Investigation of mRNA–lncRNA interactions

  • Identification of miRNA sponges and target regulatory elements

  • Analysis of competitive endogenous RNA (ceRNA) regulatory networks

Advantages

  • Comprehensive RNA analysis

    The lncRNA and small RNA libraries are constructed simultaneously to detect miRNAs, mRNAs, lncRNAs and circRNAs, enabling a comprehensive characterization of transcriptional regulatory networks.

    Extensive experience

    We were among the first companies to offer whole transcriptome sequencing (WTS) and comprehensive RNA analysis services, first launched in 2008.

  • Specialist team

    Our team includes experienced professionals who can provide expert guidance in experimental design and data interpretation.

    Reliable and fast turnaround time

    A dedicated project manager ensures results are delivered within 20 business days of sample quality verification.

Sample Requirements


Whole Transcriptome Sequencing (WTS) Sample Requirements.png


Note: Sample amounts are provided for reference only.  For detailed information, please contact us with your customized requests.


Our Comprehensive Service


At LC Sciences, we offer a genome-wide microRNA expression profiling service utilizing a microarray detection system that was developed specifically for microRNA detection.  Send us your total RNA sample and we’ll perform all the necessary functions from sample QC through data analysis.  We can perform microarray analysis on a single sample to create a simple expression profile or we can hybridize two samples to the same microarray for “dual sample” analysis.  This is very useful whenever comparison of two samples is needed such as wildtype vs. mutant or samples treated in two different ways.

Our “Total RNA to Data” comprehensive service includes: Sample QC, Sample Preparation and Labeling, microRNA Detection (hybridization to a µParaflo® microfluidics chip), Array Scan and Data Extraction, and Full Data Analysis.


In about 2-3 weeks you will receive: original and processed scan images, array layout and a list of sequences,  raw and processed data, a list of differentially expressed transcripts (dual sample arrays only), and a summary of the results.


Bioinformatics Analysis Pipeline

Whole Transcriptome Sequencing (WTS) Bioinformatics Analysis Pipeline.png

Inform Us Of Your Future Project!

Leverage our expertise to acquire precise, robust data for your research. Our team ensures efficient delivery and reliable support. Contact us to discuss your project.

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Our portfolio of additional services includes Bioinformatic Services, Oligomix, MicroRNA Profiling Microarray, DNA/RNA Aptamer Microarray, Epitope Mapping, and Kinase Profiling. These services are designed to support various aspects of molecular research and biomolecular analysis, providing comprehensive solutions tailored to your specific scientific needs.
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